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Illumina Inc cdna
Cdna, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 11886 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cdna+library+preparation/Nextera+XT+DNA+Library+Preparation+Kit/pm41826404-319-16-10
Average 99 stars, based on 11886 article reviews
cdna - by Bioz Stars, 2026-10
99/100 stars

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Related Articles

cDNA Library Assay:

Article Title: Claudin-17 Deficiency Drives Vascular Permeability and Inflammation Causing Lung Injury
Article Snippet: RNA quality was evaluated using the Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA), ensuring an RNA Integrity Number (RIN) greater than 5. .. Total RNA was processed for cDNA library preparation using the TruSeq Stranded Total RNA kit (Illumina, San Diego, CA, USA), which depletes cytoplasmic ribosomal RNA. ..

Article Title: Single-cell analysis of 5-aminolevulinic acid intraoperative labeling specificity for glioblastoma
Article Snippet: Beads from each region were extracted separately, washed sequentially with TE/SDS buffer (10 mM Tris–HCl, 1 mM EDTA, 0.5% SDS), TE/TW buffer, and nuclease-free water. cDNA amplification was performed in 50 μL PCR solution [1X Hifi Hot Start Ready mix (Kapa Biosystems, cat# KK2601), 1 μM SMRTpcr primer (Supplementary Table S6)], with 16 amplification cycles (95 °C 3 min, 4 cycles of (98 °C 20 s, 65 °C 45 s, 72 °C 3 min), 12 cycles of (98 °C 20 s, 67 °C 20 s, 72 °C 3 min), 72 °C 5 min). .. PCR product was purified using SPRI paramagnetic bead (Beckman, cat# A63881) with a bead-to-sample volume ratio of 0.6:1. cDNA library preparation was performed using illumina Nextera library perp kit (Illumina, FC-131-1024) with 0.6ng cDNA as input. .. The scRNA-seq libraries were pooled and sequenced on an Illumina NextSeq 500 sequencer using a 75 cycle High Output Kit (26-cycle read 1, 58-cycle read 2, and 8-cycle index 1) with custom read 1 primer.

Article Title: Influence of Epigenetic Regulators Expression on Gastric Cancer Prognosis
Article Snippet: .. RNA was extracted, quality checked, and used for cDNA library preparation (TruSeq, Illumina). ..

Article Title: Transcriptional Adaptations to Muscle Loading in a Murine Model of Achilles Tendinopathy
Article Snippet: .. Samples of adequate quality (RNA integrity number (RIN) ≥ 4.0; Agilent 2100) but low RNA concentration were combined with other samples from the same treatment group to achieve the minimum total RNA required (100 ng), resulting in n < 6 in some groups (Table ). cDNA library preparation (TruSeq DNA Library Preparation kits, Illumina Inc.) and sequencing (Illumina NovaSeq. ..

Article Title: Modeling Masticatory Myalgia to Headache-like Referred Pain Triggers Local Gene Plasticity at Referred Pain Sites
Article Snippet: Frozen and sliced MM as previously described [ ] and freshly dissected entire dura matter were homogenized in Rn-easy solution (Qiagen) using a Bead Mill Homogenizer (Omni International, Kennesaw, GA). .. Extraction of RNA, RNA quality and integrity control, cDNA library preparation with oligo-dT primers followed the Illumina TruSeq stranded mRNA sample preparation guide (Illumina, San Diego, CA), and sequencing procedure with Illumina HiSeq 3000 platform with 30-50×10 6 bp reading depth were previously described in detail [ ; ; ]. ..

Article Title: Claudin-17 Deficiency Drives Vascular Permeability and Inflammation Causing Lung Injury.
Article Snippet: RNA quality was evaluated using the Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA), ensuring an RNA Integrity Number (RIN) greater than 5. .. Total RNA was processed for cDNA library preparation using the TruSeq Stranded Total RNA kit (Illumina, San Diego, CA, USA), which depletes cytoplasmic ribosomal RNA. ..

Article Title:
Article Snippet: .. 20 21 cDNA library construction and sequencing 22 Total RNA Globin reduction and cDNA library preparation were performed with the 23 Illumina TruSeq Stranded Total RNA with Ribo-Zero Globin kit (Illumina, Inc., San Diego, 24 CA). .. Quantification with picogreen, size analysis on an Agilent Bioanalyzer or Tapestation 25 doi: 10.1136/bmjresp-2021-001182:e001182.

Article Title: Identification of Rcr12 , a single dominant clubroot resistance gene near Rcr6 on chromosome B3 of Brassica nigra
Article Snippet: The Experion RNA StdSens analysis kit (Bio-Rad; Montreal, Canada) was employed to ensure RNA quality, with a stipulation that the RNA integrity number should exceed 8 for each sample. .. Subsequent steps in the process included cDNA library preparation following the TruSeq RNA Sample Preparation v2 Guide (Illumina; San Diego, USA). .. The NanoDrop ND-2000c spectrophotometer was utilized to verify cDNA concentrations and purity.

Polymerase Chain Reaction:

Article Title: Single-cell analysis of 5-aminolevulinic acid intraoperative labeling specificity for glioblastoma
Article Snippet: Beads from each region were extracted separately, washed sequentially with TE/SDS buffer (10 mM Tris–HCl, 1 mM EDTA, 0.5% SDS), TE/TW buffer, and nuclease-free water. cDNA amplification was performed in 50 μL PCR solution [1X Hifi Hot Start Ready mix (Kapa Biosystems, cat# KK2601), 1 μM SMRTpcr primer (Supplementary Table S6)], with 16 amplification cycles (95 °C 3 min, 4 cycles of (98 °C 20 s, 65 °C 45 s, 72 °C 3 min), 12 cycles of (98 °C 20 s, 67 °C 20 s, 72 °C 3 min), 72 °C 5 min). .. PCR product was purified using SPRI paramagnetic bead (Beckman, cat# A63881) with a bead-to-sample volume ratio of 0.6:1. cDNA library preparation was performed using illumina Nextera library perp kit (Illumina, FC-131-1024) with 0.6ng cDNA as input. .. The scRNA-seq libraries were pooled and sequenced on an Illumina NextSeq 500 sequencer using a 75 cycle High Output Kit (26-cycle read 1, 58-cycle read 2, and 8-cycle index 1) with custom read 1 primer.

Purification:

Article Title: Single-cell analysis of 5-aminolevulinic acid intraoperative labeling specificity for glioblastoma
Article Snippet: Beads from each region were extracted separately, washed sequentially with TE/SDS buffer (10 mM Tris–HCl, 1 mM EDTA, 0.5% SDS), TE/TW buffer, and nuclease-free water. cDNA amplification was performed in 50 μL PCR solution [1X Hifi Hot Start Ready mix (Kapa Biosystems, cat# KK2601), 1 μM SMRTpcr primer (Supplementary Table S6)], with 16 amplification cycles (95 °C 3 min, 4 cycles of (98 °C 20 s, 65 °C 45 s, 72 °C 3 min), 12 cycles of (98 °C 20 s, 67 °C 20 s, 72 °C 3 min), 72 °C 5 min). .. PCR product was purified using SPRI paramagnetic bead (Beckman, cat# A63881) with a bead-to-sample volume ratio of 0.6:1. cDNA library preparation was performed using illumina Nextera library perp kit (Illumina, FC-131-1024) with 0.6ng cDNA as input. .. The scRNA-seq libraries were pooled and sequenced on an Illumina NextSeq 500 sequencer using a 75 cycle High Output Kit (26-cycle read 1, 58-cycle read 2, and 8-cycle index 1) with custom read 1 primer.

Concentration Assay:

Article Title: Transcriptional Adaptations to Muscle Loading in a Murine Model of Achilles Tendinopathy
Article Snippet: .. Samples of adequate quality (RNA integrity number (RIN) ≥ 4.0; Agilent 2100) but low RNA concentration were combined with other samples from the same treatment group to achieve the minimum total RNA required (100 ng), resulting in n < 6 in some groups (Table ). cDNA library preparation (TruSeq DNA Library Preparation kits, Illumina Inc.) and sequencing (Illumina NovaSeq. ..

DNA Library Preparation:

Article Title: Transcriptional Adaptations to Muscle Loading in a Murine Model of Achilles Tendinopathy
Article Snippet: .. Samples of adequate quality (RNA integrity number (RIN) ≥ 4.0; Agilent 2100) but low RNA concentration were combined with other samples from the same treatment group to achieve the minimum total RNA required (100 ng), resulting in n < 6 in some groups (Table ). cDNA library preparation (TruSeq DNA Library Preparation kits, Illumina Inc.) and sequencing (Illumina NovaSeq. ..

Sequencing:

Article Title: Transcriptional Adaptations to Muscle Loading in a Murine Model of Achilles Tendinopathy
Article Snippet: .. Samples of adequate quality (RNA integrity number (RIN) ≥ 4.0; Agilent 2100) but low RNA concentration were combined with other samples from the same treatment group to achieve the minimum total RNA required (100 ng), resulting in n < 6 in some groups (Table ). cDNA library preparation (TruSeq DNA Library Preparation kits, Illumina Inc.) and sequencing (Illumina NovaSeq. ..

Article Title: Modeling Masticatory Myalgia to Headache-like Referred Pain Triggers Local Gene Plasticity at Referred Pain Sites
Article Snippet: Frozen and sliced MM as previously described [ ] and freshly dissected entire dura matter were homogenized in Rn-easy solution (Qiagen) using a Bead Mill Homogenizer (Omni International, Kennesaw, GA). .. Extraction of RNA, RNA quality and integrity control, cDNA library preparation with oligo-dT primers followed the Illumina TruSeq stranded mRNA sample preparation guide (Illumina, San Diego, CA), and sequencing procedure with Illumina HiSeq 3000 platform with 30-50×10 6 bp reading depth were previously described in detail [ ; ; ]. ..

Article Title:
Article Snippet: .. 20 21 cDNA library construction and sequencing 22 Total RNA Globin reduction and cDNA library preparation were performed with the 23 Illumina TruSeq Stranded Total RNA with Ribo-Zero Globin kit (Illumina, Inc., San Diego, 24 CA). .. Quantification with picogreen, size analysis on an Agilent Bioanalyzer or Tapestation 25 doi: 10.1136/bmjresp-2021-001182:e001182.

Extraction:

Article Title: Modeling Masticatory Myalgia to Headache-like Referred Pain Triggers Local Gene Plasticity at Referred Pain Sites
Article Snippet: Frozen and sliced MM as previously described [ ] and freshly dissected entire dura matter were homogenized in Rn-easy solution (Qiagen) using a Bead Mill Homogenizer (Omni International, Kennesaw, GA). .. Extraction of RNA, RNA quality and integrity control, cDNA library preparation with oligo-dT primers followed the Illumina TruSeq stranded mRNA sample preparation guide (Illumina, San Diego, CA), and sequencing procedure with Illumina HiSeq 3000 platform with 30-50×10 6 bp reading depth were previously described in detail [ ; ; ]. ..

Control:

Article Title: Modeling Masticatory Myalgia to Headache-like Referred Pain Triggers Local Gene Plasticity at Referred Pain Sites
Article Snippet: Frozen and sliced MM as previously described [ ] and freshly dissected entire dura matter were homogenized in Rn-easy solution (Qiagen) using a Bead Mill Homogenizer (Omni International, Kennesaw, GA). .. Extraction of RNA, RNA quality and integrity control, cDNA library preparation with oligo-dT primers followed the Illumina TruSeq stranded mRNA sample preparation guide (Illumina, San Diego, CA), and sequencing procedure with Illumina HiSeq 3000 platform with 30-50×10 6 bp reading depth were previously described in detail [ ; ; ]. ..

Sample Prep:

Article Title: Modeling Masticatory Myalgia to Headache-like Referred Pain Triggers Local Gene Plasticity at Referred Pain Sites
Article Snippet: Frozen and sliced MM as previously described [ ] and freshly dissected entire dura matter were homogenized in Rn-easy solution (Qiagen) using a Bead Mill Homogenizer (Omni International, Kennesaw, GA). .. Extraction of RNA, RNA quality and integrity control, cDNA library preparation with oligo-dT primers followed the Illumina TruSeq stranded mRNA sample preparation guide (Illumina, San Diego, CA), and sequencing procedure with Illumina HiSeq 3000 platform with 30-50×10 6 bp reading depth were previously described in detail [ ; ; ]. ..

Article Title: Identification of Rcr12 , a single dominant clubroot resistance gene near Rcr6 on chromosome B3 of Brassica nigra
Article Snippet: The Experion RNA StdSens analysis kit (Bio-Rad; Montreal, Canada) was employed to ensure RNA quality, with a stipulation that the RNA integrity number should exceed 8 for each sample. .. Subsequent steps in the process included cDNA library preparation following the TruSeq RNA Sample Preparation v2 Guide (Illumina; San Diego, USA). .. The NanoDrop ND-2000c spectrophotometer was utilized to verify cDNA concentrations and purity.



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